Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(005)-Segment cluster 2668 (cutoff=2.5 Å)
Cluster size 150 structure(s)
Representative structure 2nz4:S (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence NNNNN
Cluster members
ACAAA
1yl4:A, 1224-1230, 2b64:A, 1224-1230, 2b9m:A, 1224-1230, 2b9o:A, 1224-1230, 2hgi:A, 1224-1230, 2hgp:A, 1224-1230, 2hgr:A, 1224-1230
AGGAA
2euy:A, 6-12
AGUUG
1nkw:0, 2535-2541, 1ond:0, 2534-2540
AUGGC
1i97:A, 296-302
CAAAC
3bwp:A, 116-122, 3eog:A, 116-122, 3eoh:A, 116-122
CCAAA
2b9m:A, 194-200, 2b9o:A, 194-200
CGAAC
1vq9:0, 1583-1589, 1vqo:0, 1583-1589
CGACC
1yhq:0, 282-288, 1yi2:0, 282-288, 1yij:0, 282-288, 1yit:0, 282-288, 1yj9:0, 282-288, 1yjn:0, 282-288, 1yjw:0, 282-288, 3cc2:0, 282-288, 3cc4:0, 282-288, 3cc7:0, 282-288, 3cce:0, 282-288, 3ccj:0, 282-288, 3ccl:0, 282-288, 3ccm:0, 282-288, 3ccq:0, 282-288, 3ccr:0, 282-288, 3ccs:0, 282-288, 3ccu:0, 282-288, 3ccv:0, 282-288, 3cd6:0, 282-288, 3cma:0, 282-288, 3cme:0, 282-288
CUGAA
1vs6:B, 2752-2758, 1vs8:B, 2752-2758, 2aw4:B, 2752-2758, 2awb:B, 2752-2758, 2i2t:B, 2752-2758, 2i2v:B, 2752-2758, 2j28:B, 2752-2758, 2qam:B, 2752-2758, 2qao:B, 2752-2758, 2qba:B, 2752-2758, 2qbc:B, 2752-2758, 2qbe:B, 2752-2758, 2qbg:B, 2752-2758, 2qbi:B, 2752-2758, 2qbk:B, 2752-2758, 2qov:B, 2752-2758, 2qox:B, 2752-2758, 2qoz:B, 2752-2758, 2qp1:B, 2752-2758, 2z4l:B, 2752-2758, 2z4n:B, 2752-2758, 3df2:B, 2752-2758, 3df4:B, 2752-2758
GAAAU
1ond:0, 780-786, 1p9x:0, 757-763, 1xbp:0, 780-786, 1y0q:A, 135-141, 1z58:2, 774-780, 2d3o:0, 780-786, 2rkj:C, 144-150, 2rkj:G, 144-150, 2rkj:K, 144-150, 2rkj:O, 144-150, 3bbo:A, 798-804
GAACC
1xbp:0, 230-236, 2o43:A, 230-236, 2o44:A, 230-236, 2o45:A, 230-236, 2ogm:0, 230-236, 2ogo:0, 229-235, 2zjp:X, 230-236
GAACU
1sm1:0, 165-171
GACAU
1ffk:0, 687-693, 1jj2:0, 688-694, 1k73:A, 688-694, 1k8a:A, 688-694, 1k9m:A, 688-694, 1kc8:A, 688-694, 1kd1:A, 688-694, 1kqs:0, 688-694, 1m1k:A, 688-694, 1m90:A, 688-694, 1n8r:A, 688-694, 1nji:A, 688-694, 1q7y:A, 688-694, 1q81:A, 688-694, 1q82:A, 688-694, 1q86:A, 688-694, 1qvf:0, 688-694, 1qvg:0, 688-694, 1s1i:3, 690-696, 1s72:0, 688-694, 1vq4:0, 688-694, 1vq5:0, 688-694, 1vq6:0, 688-694, 1vq7:0, 688-694, 1vq8:0, 688-694, 1vq9:0, 688-694, 1vqk:0, 688-694, 1vql:0, 688-694, 1vqm:0, 688-694, 1vqn:0, 688-694, 1vqo:0, 688-694, 1vqp:0, 688-694, 1w2b:0, 688-694, 1yhq:0, 688-694, 1yi2:0, 688-694, 1yij:0, 688-694, 1yit:0, 688-694, 1yj9:0, 688-694, 1yjn:0, 688-694, 1yjw:0, 688-694, 2otj:0, 688-694, 2otl:0, 688-694, 2qa4:0, 687-693, 2qex:0, 688-694, 3cc2:0, 688-694, 3cc4:0, 688-694, 3cc7:0, 688-694, 3cce:0, 688-694, 3ccj:0, 688-694, 3ccl:0, 688-694, 3ccm:0, 688-694, 3ccq:0, 688-694, 3ccr:0, 688-694, 3ccs:0, 688-694, 3ccu:0, 688-694, 3ccv:0, 688-694, 3cd6:0, 688-694, 3cma:0, 688-694, 3cme:0, 688-694, 3cpw:0, 688-694
GGUGC
1ibl:A, 996-1002
GUGCC
2vqf:A, 997-1003
UAAAU
2nz4:P, 96-102, 2nz4:Q, 96-102, 2nz4:R, 96-102, 2nz4:S, 96-102
UAGGU
2v46:A, 805-811
UGGGA
3cf5:X, 1969-1975