Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(005)-Segment cluster 769 (cutoff=2.0 Å)
Cluster size 128 structure(s)
Representative structure 1ob2:B (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence DMDBH
Cluster members
AGACA
1vs6:B, 924-930, 1vs8:B, 924-930, 2aw4:B, 924-930, 2awb:B, 924-930, 2i2t:B, 924-930, 2i2v:B, 924-930, 2j28:B, 924-930, 2qam:B, 924-930, 2qao:B, 924-930, 2qbk:B, 924-930, 2qov:B, 924-930, 2qox:B, 924-930, 2qoz:B, 924-930, 2qp1:B, 924-930, 2z4l:B, 924-930, 2z4n:B, 924-930, 3bbx:B, 1002-1008, 3df2:B, 924-930, 3df4:B, 924-930
AGAUC
2fmt:C, 44-50, 2fmt:D, 44-50, 3cw5:A, 44-50, 3cw6:A, 44-50
AGGUC
1ehz:A, 43-49, 1evv:A, 43-49, 1fcw:A, 43-49, 1fcw:B, 43-49, 1fcw:C, 43-49, 1fcw:D, 43-49, 1fcw:E, 43-49, 1ffy:T, 44-50, 1gax:C, 42-48, 1gax:D, 42-48, 1gix:B, 43-49, 1gix:C, 43-49, 1i9v:A, 43-49, 1ivs:C, 42-48, 1ivs:D, 42-48, 1jgo:B, 43-49, 1jgo:C, 43-49, 1jgp:B, 43-49, 1jgp:C, 43-49, 1jgq:B, 43-49, 1jgq:C, 43-49, 1mj1:C, 43-49, 1mj1:D, 43-49, 1ml5:B, 43-49, 1ob2:B, 43-49, 1ob5:B, 43-49, 1ob5:D, 43-49, 1ob5:F, 43-49, 1pns:V, 43-49, 1pns:W, 43-49, 1qu2:T, 44-50, 1qu3:T, 44-50, 1sz1:E, 43-49, 1sz1:F, 43-49, 1tn2:A, 43-49, 1tra:A, 43-49, 1ttt:D, 43-49, 1ttt:E, 43-49, 1ttt:F, 43-49, 1yl4:B, 43-49, 1yl4:C, 43-49, 1zo1:F, 43-49, 1zo3:A, 43-49, 1zo3:B, 43-49, 2csx:C, 44-50, 2csx:D, 44-50, 2ct8:C, 44-50, 2ct8:D, 44-50, 2gy9:U, 43-49, 2gy9:V, 43-49, 2gy9:W, 43-49, 2gyb:U, 43-49, 2gyb:V, 43-49, 2gyb:W, 43-49, 2hgi:C, 43-49, 2hgr:C, 43-49, 2j00:V, 44-50, 2ow8:0, 43-49, 2qnh:2, 43-49, 3d5a:Y, 44-50, 3d5a:Z, 44-50, 3d5c:Y, 44-50, 3d5c:Z, 44-50, 3deg:A, 43-49, 3deg:B, 44-50, 486d:C, 43-49, 4tna:A, 43-49, 4tra:A, 43-49, 6tna:A, 43-49
AGGUU
2azx:C, 42-48, 2azx:D, 42-48
AGUGA
1j5a:A, 893-899, 1jzx:A, 893-899, 1jzy:A, 893-899, 1jzz:A, 893-899, 1k01:A, 893-899, 1njm:0, 885-891, 1njn:0, 885-891, 1njo:0, 885-891, 1njp:0, 885-891, 1p9x:0, 862-868, 1pnu:0, 901-907, 1pny:0, 901-907, 1sm1:0, 885-891, 2d3o:0, 885-891, 2o43:A, 885-891
AUGUC
1yfg:A, 42-48
GGGGC
1h4q:T, 41-47, 1h4s:T, 41-47
GGGUC
2k4c:A, 43-49
GUGUC
1eiy:C, 43-49, 2hgi:D, 43-49, 2hgp:B, 43-49, 2hgp:C, 43-49, 2hgp:D, 43-49, 2hgr:D, 43-49, 2j02:W, 43-49, 2jl5:V, 43-49, 2jl7:V, 43-49, 2ow8:z, 43-49, 3bbv:z, 43-49
UGGUC
3eph:E, 41-47, 3epj:E, 41-47, 3epk:E, 41-47, 3epl:E, 41-47