Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(005)-Segment cluster 4174 (cutoff=2.0 Å)
Cluster size 52 structure(s)
Representative structure 3df4:B (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence MDHMR
Cluster members
GAAGA
1s1i:3, 2531-2537
GACGG
2hua:A, 10-16
GGAGA
1vsa:w, 2307-2313, 1vsp:w, 2307-2313, 1yl3:A, 2293-2299, 2b66:A, 2235-2241, 2b9n:A, 2235-2241, 2b9p:A, 2235-2241, 2hgj:A, 2307-2313, 2hgq:A, 2307-2313, 2hgu:A, 2307-2313
GGUUA
1vs6:B, 2264-2270, 1vs8:B, 2264-2270, 2aw4:B, 2264-2270, 2awb:B, 2264-2270, 2i2t:B, 2264-2270, 2i2v:B, 2264-2270, 2j28:B, 2264-2270, 2qam:B, 2264-2270, 2qao:B, 2264-2270, 2qba:B, 2264-2270, 2qbc:B, 2264-2270, 2qbe:B, 2264-2270, 2qbg:B, 2264-2270, 2qbi:B, 2264-2270, 2qbk:B, 2264-2270, 2qov:B, 2264-2270, 2qox:B, 2264-2270, 2qoz:B, 2264-2270, 2qp1:B, 2264-2270, 2z4l:B, 2264-2270, 2z4n:B, 2264-2270, 3bbx:B, 2541-2547, 3df2:B, 2264-2270, 3df4:B, 2264-2270
GUAGA
1j5a:A, 2217-2223, 1jzx:A, 2217-2223, 1jzy:A, 2217-2223, 1jzz:A, 2217-2223, 1k01:A, 2217-2223, 1vor:B, 2253-2259, 1vou:B, 2253-2259, 1vow:B, 2253-2259, 1voy:B, 2253-2259, 1vp0:B, 2253-2259, 2aar:0, 2209-2215, 2o43:A, 2209-2215, 2o45:A, 2197-2203, 2zjr:X, 2117-2123
UGUUG
1p9x:0, 783-789, 1sm1:0, 806-812, 1xbp:0, 806-812