Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(005)-Segment cluster 3163 (cutoff=2.0 Å)
Cluster size 79 structure(s)
Representative structure 2qov:B (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence MNHNB
Cluster members
GAAAG
1i97:A, 746-752, 1voq:A, 757-763, 1vos:A, 757-763, 1vov:A, 757-763, 1vox:A, 757-763, 1voz:A, 757-763
GAAGU
1pns:A, 1425-1431, 1pnx:A, 1425-1431
GAUUC
2d3o:0, 208-214, 2ogn:0, 208-214
GCUGU
1nwx:0, 1905-1911, 1nwy:0, 1905-1911, 1ond:0, 1904-1910, 1vs6:B, 1972-1978, 1vs8:B, 1972-1978, 1vsa:w, 1988-1994, 1y69:0, 1905-1911, 1yl3:A, 1988-1994, 2aw4:B, 1972-1978, 2awb:B, 1972-1978, 2b66:A, 1988-1994, 2b9n:A, 1988-1994, 2b9p:A, 1988-1994, 2hgj:A, 1988-1994, 2hgu:A, 1988-1994, 2i2t:B, 1972-1978, 2i2v:B, 1972-1978, 2j01:A, 1905-1911, 2j03:A, 1905-1911, 2j28:B, 1972-1978, 2jl6:A, 1984-1990, 2jl8:A, 1984-1990, 2o43:A, 1905-1911, 2o45:A, 1902-1908, 2ogm:0, 1905-1911, 2ogn:0, 1905-1911, 2qam:B, 1972-1978, 2qao:B, 1972-1978, 2qba:B, 1972-1978, 2qbc:B, 1972-1978, 2qbe:B, 1972-1978, 2qbg:B, 1972-1978, 2qbi:B, 1972-1978, 2qbk:B, 1972-1978, 2qov:B, 1972-1978, 2qox:B, 1972-1978, 2qoz:B, 1972-1978, 2qp1:B, 1972-1978, 2v47:A, 1905-1911, 2v49:A, 1905-1911, 2z4l:B, 1972-1978, 2z4n:B, 1972-1978, 2zjp:X, 1866-1872, 2zjq:X, 1866-1872, 2zjr:X, 1863-1869, 3bbx:B, 2068-2074, 3cf5:X, 1866-1872, 3d5b:A, 1983-1989, 3d5d:A, 1983-1989, 3df2:B, 1972-1978, 3df4:B, 1972-1978, 3dll:X, 1866-1872
GGAAG
1p9x:0, 2629-2635, 2j01:A, 2640-2646, 2j03:A, 2640-2646
GGCCU
1n34:A, 565-571
GGCGG
1vor:B, 2416-2422, 1vou:B, 2416-2422, 1vow:B, 2416-2422, 1voy:B, 2416-2422, 1vp0:B, 2416-2422, 2b66:A, 2398-2404, 2b9n:A, 2398-2404, 2b9p:A, 2398-2404
GGUAG
2vhm:B, 1169-1175
UCUCC
1j5a:A, 2586-2592, 1jzx:A, 2586-2592, 1jzz:A, 2586-2592
UUUCC
2b9n:A, 2604-2610