Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(005)-Segment cluster 1000 (cutoff=1.5 Å)
Cluster size 115 structure(s)
Representative structure 1qvf:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence NHRAA
Cluster members
ACAAA
2qp0:A, 1243-1249, 3df1:A, 1243-1249, 3df3:A, 1243-1249
ACGAA
2a64:A, 275-281
CCAAA
1ffk:0, 974-980, 1jj2:0, 978-984, 1k73:A, 978-984, 1k8a:A, 978-984, 1k9m:A, 978-984, 1kc8:A, 978-984, 1kd1:A, 978-984, 1kqs:0, 978-984, 1m1k:A, 978-984, 1m90:A, 978-984, 1n8r:A, 978-984, 1nji:A, 978-984, 1q7y:A, 978-984, 1q81:A, 978-984, 1q82:A, 978-984, 1q86:A, 978-984, 1qvf:0, 978-984, 1qvg:0, 978-984, 1s1i:3, 1074-1080, 1s72:0, 978-984, 1vq4:0, 978-984, 1vq5:0, 978-984, 1vq6:0, 978-984, 1vq7:0, 978-984, 1vq8:0, 978-984, 1vq9:0, 978-984, 1vqk:0, 978-984, 1vql:0, 978-984, 1vqm:0, 978-984, 1vqn:0, 978-984, 1vqo:0, 978-984, 1vqp:0, 978-984, 1w2b:0, 978-984, 1yhq:0, 978-984, 1yi2:0, 978-984, 1yij:0, 978-984, 1yit:0, 978-984, 1yj9:0, 978-984, 1yjn:0, 978-984, 1yjw:0, 978-984, 2otj:0, 978-984, 2otl:0, 978-984, 2qa4:0, 977-983, 2qex:0, 978-984, 3cc2:0, 978-984, 3cc4:0, 978-984, 3cc7:0, 978-984, 3cce:0, 978-984, 3ccj:0, 978-984, 3ccl:0, 978-984, 3ccm:0, 978-984, 3ccq:0, 978-984, 3ccr:0, 978-984, 3ccs:0, 978-984, 3ccu:0, 978-984, 3ccv:0, 978-984, 3cd6:0, 978-984, 3cma:0, 978-984, 3cme:0, 978-984, 3cpw:0, 978-984
CCGAA
1jzx:A, 867-873, 1vor:B, 875-881, 1vou:B, 875-881, 1vow:B, 875-881, 1voy:B, 875-881, 1vp0:B, 875-881, 1vsa:w, 938-944, 1vsp:w, 938-944, 1yl3:A, 937-943, 2b66:A, 937-943, 2b9n:A, 937-943, 2b9p:A, 937-943, 2d3o:0, 859-865, 2hgj:A, 937-943, 2hgq:A, 937-943, 2hgu:A, 937-943, 2j01:A, 915-921, 2j03:A, 915-921, 2jl6:A, 942-948, 2jl8:A, 942-948, 2v47:A, 1491-1497, 2v49:A, 1491-1497, 2zjp:X, 837-843, 2zjq:X, 837-843, 2zjr:X, 834-840, 3cf5:X, 837-843, 3d5b:A, 933-939, 3d5d:A, 933-939, 3dll:X, 837-843
CUGAA
1vs6:B, 2752-2758, 1vs8:B, 2752-2758, 2aw4:B, 2752-2758, 2awb:B, 2752-2758, 2j28:B, 2752-2758, 2qam:B, 2752-2758, 2qao:B, 2752-2758, 2qba:B, 2752-2758, 2qbc:B, 2752-2758, 2qbe:B, 2752-2758, 2qbi:B, 2752-2758, 2qbk:B, 2752-2758, 2qov:B, 2752-2758, 2qox:B, 2752-2758, 2qoz:B, 2752-2758, 2qp1:B, 2752-2758, 2z4l:B, 2752-2758, 2z4n:B, 2752-2758, 3df2:B, 2752-2758, 3df4:B, 2752-2758
GAGAA
1yl3:A, 1675-1681
UUGAA
2gyc:0, 638-644