Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(004)-Segment cluster 2974 (cutoff=3.0 Å)
Cluster size 72 structure(s)
Representative structure 2gya:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence NNNN
Cluster members
AAGA
1vs6:B, 955-960, 1vs8:B, 955-960, 2aw4:B, 955-960, 2awb:B, 955-960, 2gya:0, 899-904, 2j28:B, 955-960, 2qam:B, 955-960, 2qao:B, 955-960, 2qba:B, 955-960, 2qbc:B, 955-960, 2qbi:B, 955-960, 2qbk:B, 955-960, 2qov:B, 955-960, 2qox:B, 955-960, 2qoz:B, 955-960, 2qp1:B, 955-960, 2z4l:B, 955-960, 2z4n:B, 955-960
ACCC
1p9x:0, 2305-2310, 1z58:2, 2309-2314
ACGG
2o45:A, 1504-1509
AGAA
1c2w:B, 1651-1656
AGUU
1fka:A, 240-245, 1voq:A, 244-249, 1vos:A, 244-249, 1vov:A, 244-249, 1vox:A, 244-249, 1voz:A, 244-249
CGCG
1p9x:0, 1572-1577
GAAG
1c2w:B, 1542-1547
GAAU
1vsa:w, 114-119, 1yl3:A, 114-119, 2b66:A, 114-119, 2b9n:A, 114-119, 2b9p:A, 114-119, 2hgj:A, 114-119, 2hgq:A, 114-119, 2hgu:A, 114-119
GAGA
1nkw:0, 916-921, 1nwx:0, 916-921, 1nwy:0, 916-921, 1ond:0, 916-921, 1p9x:0, 893-898, 2o43:A, 916-921, 2o45:A, 913-918, 2ogm:0, 916-921, 2zjp:X, 894-899, 2zjq:X, 894-899, 2zjr:X, 891-896, 3dll:X, 894-899
GGAC
1j5a:A, 1380-1385, 1jzx:A, 1380-1385, 1jzy:A, 1380-1385, 1jzz:A, 1380-1385, 1k01:A, 1380-1385, 1njm:0, 1372-1377, 1njn:0, 1372-1377, 1njo:0, 1372-1377, 1njp:0, 1372-1377, 1pnu:0, 1388-1393, 1pny:0, 1388-1393
GUAA
2vhm:B, 1185-1190, 2vhn:B, 1185-1190
UCAG
1nkw:0, 2753-2758, 1nwx:0, 2753-2758, 1nwy:0, 2753-2758, 1ond:0, 2752-2757, 2o43:A, 2753-2758, 2o45:A, 2738-2743, 2ogo:0, 2752-2757
UUCA
1vsp:w, 2573-2578
UUGG
2d3o:0, 2007-2012