Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(004)-Segment cluster 4566 (cutoff=2.0 Å)
Cluster size 63 structure(s)
Representative structure 2zjp:X (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence DHNN
Cluster members
AAGU
1hr0:A, 1464-1469
AAUC
2b66:A, 2797-2802, 2b9n:A, 2797-2802, 2b9p:A, 2797-2802
ACAG
1jj2:0, 2769-2774, 1m90:A, 2769-2774, 1nji:A, 2769-2774, 1s72:0, 2769-2774, 1w2b:0, 2769-2774, 1yi2:0, 2769-2774, 1yij:0, 2769-2774, 1yjn:0, 2769-2774, 1yjw:0, 2769-2774, 3cce:0, 2769-2774, 3ccl:0, 2769-2774, 3ccq:0, 2769-2774, 3ccs:0, 2769-2774, 3cd6:0, 2769-2774, 3cme:0, 2769-2774, 3cpw:0, 2769-2774
AUCA
2o43:A, 2770-2775
GAAC
1j5a:A, 2632-2637, 1jzx:A, 2632-2637, 1jzy:A, 2632-2637, 1jzz:A, 2632-2637, 1k01:A, 2632-2637, 1nkw:0, 2624-2629, 1nwx:0, 2624-2629, 1nwy:0, 2624-2629, 1ond:0, 2623-2628, 1sm1:0, 2624-2629, 1xbp:0, 2624-2629, 1y69:0, 2624-2629, 2aar:0, 2624-2629, 2d3o:0, 2645-2650, 2o43:A, 2624-2629, 2o44:A, 2624-2629, 2ogm:0, 2624-2629, 2ogn:0, 2624-2629, 2ogo:0, 2623-2628, 2zjp:X, 2535-2540, 2zjq:X, 2535-2540, 2zjr:X, 2532-2537, 3cf5:X, 2535-2540, 3dll:X, 2535-2540
GCAC
1u9s:A, 141-146
GUUG
1pnu:0, 807-812, 1pny:0, 807-812, 2o43:A, 807-812, 2o44:A, 807-812
UUGG
1njm:0, 1414-1419, 1njn:0, 1414-1419, 1njo:0, 1414-1419, 1njp:0, 1414-1419, 1nkw:0, 1414-1419, 1nwx:0, 1414-1419, 1nwy:0, 1414-1419, 1ond:0, 1414-1419, 1pnu:0, 1430-1435, 1pny:0, 1430-1435, 1xbp:0, 1414-1419, 2gya:0, 1387-1392, 2ogm:0, 1414-1419