Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(004)-Segment cluster 1898 (cutoff=2.0 Å)
Cluster size 132 structure(s)
Representative structure 1vq9:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence MNRA
Cluster members
GAGA
1p9x:0, 893-898, 1sm1:0, 916-921, 2aar:0, 916-921, 2d3o:0, 916-921, 2ogn:0, 916-921, 2ogo:0, 915-920, 2zjr:X, 891-896, 3bbo:A, 944-949
UCGA
1ffk:0, 2661-2666, 1jj2:0, 2712-2717, 1k73:A, 2712-2717, 1k8a:A, 2712-2717, 1k9m:A, 2712-2717, 1kc8:A, 2712-2717, 1kd1:A, 2712-2717, 1kqs:0, 2712-2717, 1m1k:A, 2712-2717, 1m90:A, 2712-2717, 1n8r:A, 2712-2717, 1nji:A, 2712-2717, 1q7y:A, 2712-2717, 1q81:A, 2712-2717, 1q82:A, 2712-2717, 1q86:A, 2712-2717, 1qvf:0, 2712-2717, 1qvg:0, 2712-2717, 1s1i:3, 3028-3033, 1s72:0, 2712-2717, 1vq4:0, 2712-2717, 1vq5:0, 2712-2717, 1vq6:0, 2712-2717, 1vq7:0, 2712-2717, 1vq8:0, 2712-2717, 1vq9:0, 2712-2717, 1vqk:0, 2712-2717, 1vql:0, 2712-2717, 1vqm:0, 2712-2717, 1vqn:0, 2712-2717, 1vqo:0, 2712-2717, 1vqp:0, 2712-2717, 1w2b:0, 2712-2717, 1yhq:0, 2712-2717, 1yi2:0, 2712-2717, 1yij:0, 2712-2717, 1yit:0, 2712-2717, 1yj9:0, 2712-2717, 1yjn:0, 2712-2717, 1yjw:0, 2712-2717, 2go5:9, 24-29, 2otj:0, 2712-2717, 2otl:0, 2712-2717, 2qa4:0, 2717-2722, 2qex:0, 2712-2717, 3cc2:0, 2712-2717, 3cc4:0, 2712-2717, 3cc7:0, 2712-2717, 3cce:0, 2712-2717, 3ccj:0, 2712-2717, 3ccl:0, 2712-2717, 3ccm:0, 2712-2717, 3ccq:0, 2712-2717, 3ccs:0, 2712-2717, 3ccu:0, 2712-2717, 3ccv:0, 2712-2717, 3cd6:0, 2712-2717, 3cma:0, 2712-2717, 3cme:0, 2712-2717, 3cpw:0, 2712-2717
UGGA
1vsa:w, 2819-2824, 1vsp:w, 2819-2824, 1yl3:A, 2805-2810, 2hgj:A, 2819-2824, 2hgq:A, 2819-2824, 2hgu:A, 2819-2824, 2j01:A, 2707-2712, 2j03:A, 2707-2712, 2jl6:A, 2786-2791, 2jl8:A, 2786-2791, 2v47:A, 2702-2707, 2v49:A, 2702-2707, 3d5b:A, 2814-2819, 3d5d:A, 2814-2819
UUAA
1njm:0, 2719-2724, 1njn:0, 2719-2724, 1njo:0, 2719-2724, 1njp:0, 2719-2724, 1nkw:0, 2719-2724, 1nwx:0, 2719-2724, 1nwy:0, 2719-2724, 1p9x:0, 2694-2699, 1pnu:0, 2763-2768, 1pny:0, 2763-2768, 1sm1:0, 2719-2724, 1y69:0, 2719-2724, 1z58:2, 2695-2700, 2aar:0, 2719-2724, 2d3o:0, 2740-2745, 2o43:A, 2719-2724, 2o44:A, 2719-2724, 2o45:A, 2704-2709, 2ogm:0, 2719-2724, 2ogn:0, 2719-2724, 2ogo:0, 2718-2723, 2zjp:X, 2630-2635, 2zjq:X, 2630-2635, 2zjr:X, 2627-2632, 3cf5:X, 2630-2635, 3dll:X, 2630-2635
UUGA
1vs6:B, 2778-2783, 1vs8:B, 2778-2783, 2aw4:B, 2778-2783, 2awb:B, 2778-2783, 2i2t:B, 2778-2783, 2i2v:B, 2778-2783, 2j28:B, 2778-2783, 2qam:B, 2778-2783, 2qao:B, 2778-2783, 2qba:B, 2778-2783, 2qbc:B, 2778-2783, 2qbe:B, 2778-2783, 2qbg:B, 2778-2783, 2qbi:B, 2778-2783, 2qbk:B, 2778-2783, 2qov:B, 2778-2783, 2qox:B, 2778-2783, 2qoz:B, 2778-2783, 2qp1:B, 2778-2783, 2z4l:B, 2778-2783, 2z4n:B, 2778-2783, 3bbx:B, 3061-3066, 3df2:B, 2778-2783, 3df4:B, 2778-2783