Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(004)-Segment cluster 482 (cutoff=1.5 Å)
Cluster size 87 structure(s)
Representative structure 1k01:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence VRHN
Cluster members
AAAA
3bbn:A, 171-176
AGAU
1asy:R, 43-48, 1asy:S, 43-48, 1asz:R, 43-48, 1asz:S, 43-48
CAAA
1vs5:A, 189-194, 1vs7:A, 189-194, 2avy:A, 189-194, 2aw7:A, 189-194, 2qal:A, 189-194, 2qan:A, 189-194, 2qb9:A, 189-194, 2qbb:A, 189-194, 2qbd:A, 189-194, 2qbf:A, 189-194, 2qbh:A, 189-194, 2qbj:A, 189-194, 2qou:A, 189-194, 2qow:A, 189-194, 2qoy:A, 189-194, 2qp0:A, 189-194, 2z4k:A, 189-194, 2z4m:A, 189-194, 3df1:A, 189-194, 3df3:A, 189-194
CAAG
1euy:B, 41-46
GAAG
1j5a:A, 1500-1505, 1jzx:A, 1500-1505, 1jzy:A, 1500-1505, 1jzz:A, 1500-1505, 1k01:A, 1500-1505, 1njm:0, 1492-1497, 1njn:0, 1492-1497, 1njo:0, 1492-1497, 1njp:0, 1492-1497, 1nkw:0, 1492-1497, 1nwx:0, 1492-1497, 1nwy:0, 1492-1497, 1ond:0, 1491-1496, 1pnu:0, 1508-1513, 1pny:0, 1508-1513, 1sm1:0, 1492-1497, 1vs6:B, 1526-1531, 1vs8:B, 1526-1531, 1y69:0, 1492-1497, 2aw4:B, 1526-1531, 2awb:B, 1526-1531, 2gya:0, 1465-1470, 2i2t:B, 1526-1531, 2i2v:B, 1526-1531, 2j28:B, 1526-1531, 2ogm:0, 1492-1497, 2ogo:0, 1491-1496, 2qam:B, 1526-1531, 2qao:B, 1526-1531, 2qba:B, 1526-1531, 2qbc:B, 1526-1531, 2qbe:B, 1526-1531, 2qbg:B, 1526-1531, 2qbi:B, 1526-1531, 2qbk:B, 1526-1531, 2qov:B, 1526-1531, 2qox:B, 1526-1531, 2qoz:B, 1526-1531, 2qp1:B, 1526-1531, 2vhm:B, 1526-1531, 2vhn:B, 1526-1531, 2z4l:B, 1526-1531, 2z4n:B, 1526-1531, 2zjp:X, 1470-1475, 2zjq:X, 1470-1475, 2zjr:X, 1467-1472, 3bbo:A, 1498-1503, 3bbx:B, 1607-1612, 3cf5:X, 1470-1475, 3df2:B, 1526-1531, 3df4:B, 1526-1531, 3dll:X, 1470-1475
GGCU
1vq8:0, 2504-2509, 1vqp:0, 2504-2509, 3ccm:0, 2504-2509, 3cd6:0, 2504-2509
GGUC
1vsp:w, 2596-2601, 2hgj:A, 2596-2601, 2hgq:A, 2596-2601, 2hgu:A, 2596-2601, 2qao:B, 2553-2558