RNA Loop Modeling

Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.

(003)-Segment cluster 7828 (cutoff=1.0 Å with sequence identity)
Cluster size	48 structure(s)
Representative structure	3cf5:X (&rarr PDB)
Downloads	Representative structure (PDB) (MC-Annotate) Member list
Consensus sequence	AUG
Cluster members
AUG 1j5a:A, 108-112, 1jzx:A, 108-112, 1jzy:A, 108-112, 1jzz:A, 108-112, 1k01:A, 108-112, 1njm:0, 108-112, 1njn:0, 108-112, 1njo:0, 108-112, 1njp:0, 108-112, 1nkw:0, 108-112, 1nwx:0, 108-112, 1nwy:0, 108-112, 1ond:0, 108-112, 1p9x:0, 108-112, 1pnu:0, 108-112, 1pny:0, 108-112, 1sm1:0, 108-112, 1vor:B, 108-112, 1vou:B, 108-112, 1vp0:B, 108-112, 1vsa:w, 108-112, 1vsp:w, 108-112, 1xbp:0, 108-112, 1y69:0, 108-112, 1yl3:A, 108-112, 2aar:0, 108-112, 2b66:A, 108-112, 2b9n:A, 108-112, 2b9p:A, 108-112, 2d3o:0, 108-112, 2j01:A, 103-107, 2j03:A, 103-107, 2jl6:A, 103-107, 2jl8:A, 103-107, 2o43:A, 108-112, 2o44:A, 108-112, 2o45:A, 108-112, 2ogm:0, 108-112, 2ogo:0, 107-111, 2v47:A, 103-107, 2v49:A, 103-107, 2zjp:X, 108-112, 2zjq:X, 108-112, 2zjr:X, 108-112, 3cf5:X, 108-112, 3d5b:A, 103-107, 3d5d:A, 103-107, 3dll:X, 108-112