Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(003)-Segment cluster 3561 (cutoff=1.0 Å)
Cluster size 146 structure(s)
Representative structure 1yj9:0 (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence BNR
Cluster members
CUG
1vs6:B, 1541-1545, 1vs8:B, 1541-1545, 2aw4:B, 1541-1545, 2awb:B, 1541-1545, 2i2t:B, 1541-1545, 2i2v:B, 1541-1545, 2j28:B, 1541-1545, 2qam:B, 1541-1545, 2qao:B, 1541-1545, 2qbe:B, 1541-1545, 2qbg:B, 1541-1545, 2qbi:B, 1541-1545, 2qbk:B, 1541-1545, 2qov:B, 1541-1545, 2qox:B, 1541-1545, 2qoz:B, 1541-1545, 2qp1:B, 1541-1545, 2z4l:B, 1541-1545, 2z4n:B, 1541-1545, 3bbx:B, 1622-1626, 3df2:B, 1541-1545, 3df4:B, 1541-1545
GUA
1i9f:A, 25-29
UAA
1ffk:0, 2701-2705, 1jj2:0, 2752-2756, 1k73:A, 2752-2756, 1k8a:A, 2752-2756, 1k9m:A, 2752-2756, 1kc8:A, 2752-2756, 1kd1:A, 2752-2756, 1kqs:0, 2752-2756, 1m1k:A, 2752-2756, 1m90:A, 2752-2756, 1n8r:A, 2752-2756, 1nji:A, 2752-2756, 1q7y:A, 2752-2756, 1q81:A, 2752-2756, 1q82:A, 2752-2756, 1q86:A, 2752-2756, 1qvf:0, 2752-2756, 1qvg:0, 2752-2756, 1s1i:3, 3068-3072, 1s72:0, 2752-2756, 1vq4:0, 2752-2756, 1vq5:0, 2752-2756, 1vq6:0, 2752-2756, 1vq7:0, 2752-2756, 1vq8:0, 2752-2756, 1vq9:0, 2752-2756, 1vqk:0, 2752-2756, 1vql:0, 2752-2756, 1vqm:0, 2752-2756, 1vqn:0, 2752-2756, 1vqo:0, 2752-2756, 1vqp:0, 2752-2756, 1w2b:0, 2752-2756, 1yhq:0, 2752-2756, 1yi2:0, 2752-2756, 1yij:0, 2752-2756, 1yit:0, 2752-2756, 1yj9:0, 2752-2756, 1yjn:0, 2752-2756, 1yjw:0, 2752-2756, 2go5:9, 64-68, 2otj:0, 2752-2756, 2otl:0, 2752-2756, 2qa4:0, 2757-2761, 2qex:0, 2752-2756, 3cc2:0, 2752-2756, 3cc4:0, 2752-2756, 3cc7:0, 2752-2756, 3cce:0, 2752-2756, 3ccj:0, 2752-2756, 3ccl:0, 2752-2756, 3ccm:0, 2752-2756, 3ccq:0, 2752-2756, 3ccr:0, 2752-2756, 3ccs:0, 2752-2756, 3ccu:0, 2752-2756, 3ccv:0, 2752-2756, 3cd6:0, 2752-2756, 3cma:0, 2752-2756, 3cme:0, 2752-2756, 3cpw:0, 2752-2756
UCA
1j5a:A, 2761-2765, 1jzx:A, 2761-2765, 1jzy:A, 2761-2765, 1jzz:A, 2761-2765, 1k01:A, 2761-2765, 1njm:0, 2753-2757, 1njn:0, 2753-2757, 1njo:0, 2753-2757, 1njp:0, 2753-2757, 1p9x:0, 2728-2732, 1pnu:0, 2797-2801, 1pny:0, 2797-2801, 1y69:0, 2753-2757, 1z58:2, 2729-2733, 2aar:0, 2753-2757, 2d3o:0, 2774-2778, 2ogm:0, 2753-2757, 2zjp:X, 2664-2668, 2zjq:X, 2664-2668, 2zjr:X, 2661-2665, 3cf5:X, 2664-2668, 3dll:X, 2664-2668
UGA
1vs6:B, 2812-2816, 1vs8:B, 2812-2816, 1yl3:A, 2839-2843, 2aw4:B, 2812-2816, 2awb:B, 2812-2816, 2gya:0, 2703-2707, 2gyc:0, 2703-2707, 2hgj:A, 2853-2857, 2hgq:A, 2853-2857, 2hgu:A, 2853-2857, 2i2t:B, 2812-2816, 2i2v:B, 2812-2816, 2j01:A, 2741-2745, 2j03:A, 2741-2745, 2j28:B, 2812-2816, 2jl6:A, 2820-2824, 2jl8:A, 2820-2824, 2qam:B, 2812-2816, 2qao:B, 2812-2816, 2qba:B, 2812-2816, 2qbc:B, 2812-2816, 2qbe:B, 2812-2816, 2qbg:B, 2812-2816, 2qbi:B, 2812-2816, 2qbk:B, 2812-2816, 2qov:B, 2812-2816, 2qox:B, 2812-2816, 2qoz:B, 2812-2816, 2qp1:B, 2812-2816, 2v47:A, 2736-2740, 2v49:A, 2736-2740, 2vhm:B, 2812-2816, 2vhn:B, 2812-2816, 2z4l:B, 2812-2816, 2z4n:B, 2812-2816, 3bbx:B, 3095-3099, 3d5b:A, 2848-2852, 3d5d:A, 2848-2852, 3df2:B, 2812-2816, 3df4:B, 2812-2816