Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(6-8-9-4-4)-Multiloop cluster 10 (cutoff=2.0 Å)
Cluster size 75 structure(s)
Representative structure 1n8r:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence RAAGAC-VAUAAYHG-ACCHCGAUG-UUYA-GGYY
Cluster members
AAAGAC-AAUAACAG-ACCUCGAUG-UUUA-GGCU
3ccs:0, 2059-2510
AAAGAC-CAUAACAG-ACCUCGAUG-UUUA-GGCU
3ccu:0, 2059-2510
AAAGAC-GAUAACAG-ACCACGAUG-UUUA-GGCU
3cce:0, 2059-2510
AAAGAC-GAUAACAG-ACCCCGAUG-UUUA-GGCU
3ccl:0, 2059-2510
AAAGAC-GAUAACAG-ACCUCGAUG-UUCA-GGUC
1vsa:w, 2056-2602, 1vsp:w, 2056-2602
AAAGAC-GAUAACAG-ACCUCGAUG-UUUA-GGCU
1yhq:0, 2059-2510, 1yi2:0, 2059-2510, 1yij:0, 2059-2510, 1yjn:0, 2059-2510, 1yjw:0, 2059-2510, 3ccm:0, 2059-2510, 3ccv:0, 2059-2510, 3cpw:0, 2059-2510
AAAGAC-GAUAACAG-ACCUCGAUG-UUUA-GGUC
1vs6:B, 2040-2559, 1vs8:B, 2040-2559, 2aw4:B, 2040-2559, 2awb:B, 2040-2559, 2i2t:B, 2040-2559, 2i2v:B, 2040-2559, 2j28:B, 2040-2559, 2qam:B, 2040-2559, 2qao:B, 2040-2559, 2qba:B, 2040-2559, 2qbc:B, 2040-2559, 2qbe:B, 2040-2559, 2qbg:B, 2040-2559, 2qbi:B, 2040-2559, 2qbk:B, 2040-2559, 2qov:B, 2040-2559, 2qox:B, 2040-2559, 2qoz:B, 2040-2559, 2qp1:B, 2040-2559, 2z4l:B, 2040-2559, 2z4n:B, 2040-2559, 3df2:B, 2040-2559, 3df4:B, 2040-2559
AAAGAC-GAUAACCG-ACCUCGAUG-UUUA-GGCU
3ccr:0, 2059-2510
AAAGAC-GAUAACUG-ACCUCGAUG-UUUA-GGCU
3ccq:0, 2059-2510
AAAGAC-GAUAAUAG-ACCUCGAUG-UUUA-GGCU
3cc7:0, 2059-2510
GAAGAC-GAUAACAG-ACCUCGAUG-UUUA-GGCU
1ffk:0, 2009-2460, 1jj2:0, 2059-2510, 1k73:A, 2059-2510, 1k8a:A, 2059-2510, 1k9m:A, 2059-2510, 1kc8:A, 2059-2510, 1kd1:A, 2059-2510, 1kqs:0, 2059-2510, 1m1k:A, 2059-2510, 1m90:A, 2059-2510, 1n8r:A, 2059-2510, 1nji:A, 2059-2510, 1q7y:A, 2059-2510, 1q81:A, 2059-2510, 1q82:A, 2059-2510, 1q86:A, 2059-2510, 1qvf:0, 2059-2510, 1s1i:3, 2245-2827, 1s72:0, 2059-2510, 1vq6:0, 2059-2510, 1vq8:0, 2059-2510, 1vq9:0, 2059-2510, 1vqk:0, 2059-2510, 1vqo:0, 2059-2510, 1w2b:0, 2059-2510, 1yit:0, 2059-2510, 1yj9:0, 2059-2510, 2otj:0, 2059-2510, 2otl:0, 2059-2510, 2qa4:0, 2064-2515, 2qex:0, 2059-2510, 3cc2:0, 2059-2510, 3cc4:0, 2059-2510, 3cma:0, 2059-2510, 3cme:0, 2059-2510