Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(009)-Hairpin cluster 357 (cutoff=2.0 Å)
Cluster size 33 structure(s)
Representative structure 1y0q:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence DNDNDNNNH
Cluster members
ACUGAAGAU
1ob2:B, 30-40, 1ob5:B, 30-40, 1ob5:D, 30-40, 1ob5:F, 30-40, 1ttt:D, 30-40, 1ttt:F, 30-40
ACUUUUAAU
1bzu:A, 4-14
AGUAACGAA
1y0q:A, 204-214
AGUGGGCUA
1kaj:A, 5-15
AUUGAAAAU
2j00:W, 30-40, 2j02:W, 30-40, 2jl5:W, 30-40, 2jl7:W, 30-40
GCUGUUCGC
1vor:B, 2485-2495, 1vou:B, 2485-2495
GGUUUUACU
1i97:A, 75-85, 2f4v:A, 72-82, 3d5a:A, 72-82, 3d5c:A, 72-82
GUGAUGAGC
2j01:A, 1658-1668, 2j03:A, 1658-1668, 2v47:A, 1658-1668, 2v49:A, 1658-1668
UAACUAUAA
1njm:0, 1827-1837, 1njn:0, 1827-1837, 1njo:0, 1827-1837, 1njp:0, 1827-1837, 1nkw:0, 1827-1837, 1nwx:0, 1827-1837, 1nwy:0, 1827-1837, 1pnu:0, 1852-1862, 1pny:0, 1852-1862
UAGAGAAUA
3bbo:A, 1586-1596