Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(008)-Hairpin cluster 859 (cutoff=2.0 Å)
Cluster size 73 structure(s)
Representative structure 2qox:B (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence SDDMRSAR
Cluster members
CGUGACAG
1p9x:0, 651-660
GAAUGGAA
1vs6:B, 2351-2360, 1vs8:B, 2351-2360, 2aw4:B, 2351-2360, 2awb:B, 2351-2360, 2i2t:B, 2351-2360, 2i2v:B, 2351-2360, 2j28:B, 2351-2360, 2qam:B, 2351-2360, 2qao:B, 2351-2360, 2qba:B, 2351-2360, 2qbc:B, 2351-2360, 2qbe:B, 2351-2360, 2qbg:B, 2351-2360, 2qbi:B, 2351-2360, 2qbk:B, 2351-2360, 2qov:B, 2351-2360, 2qox:B, 2351-2360, 2qoz:B, 2351-2360, 2qp1:B, 2351-2360, 2z4l:B, 2351-2360, 2z4n:B, 2351-2360, 3bbx:B, 2628-2637, 3df2:B, 2351-2360, 3df4:B, 2351-2360
GAGUGGAA
3bbo:A, 2343-2352
GUGUGGAA
1njm:0, 2296-2305, 1njn:0, 2296-2305, 1njo:0, 2296-2305, 1njp:0, 2296-2305, 1nkw:0, 2296-2305, 1nwx:0, 2296-2305, 1nwy:0, 2296-2305, 1ond:0, 2295-2304, 1p9x:0, 2271-2280, 1pnu:0, 2340-2349, 1pny:0, 2340-2349, 1sm1:0, 2296-2305, 1vor:B, 2340-2349, 1vou:B, 2340-2349, 1vow:B, 2340-2349, 1voy:B, 2340-2349, 1vp0:B, 2340-2349, 1vsa:w, 2394-2403, 1vsp:w, 2394-2403, 1xbp:0, 2296-2305, 1y69:0, 2296-2305, 2aar:0, 2296-2305, 2b66:A, 2322-2331, 2b9n:A, 2322-2331, 2b9p:A, 2322-2331, 2d3o:0, 2317-2326, 2hgj:A, 2394-2403, 2hgq:A, 2394-2403, 2hgu:A, 2394-2403, 2j01:A, 2282-2291, 2j03:A, 2282-2291, 2jl6:A, 2361-2370, 2jl8:A, 2361-2370, 2o44:A, 2296-2305, 2o45:A, 2284-2293, 2ogm:0, 2296-2305, 2ogn:0, 2296-2305, 2ogo:0, 2295-2304, 2v47:A, 2277-2286, 2v49:A, 2277-2286, 2zjp:X, 2207-2216, 2zjq:X, 2207-2216, 2zjr:X, 2204-2213, 3cf5:X, 2207-2216, 3d5b:A, 2389-2398, 3d5d:A, 2389-2398, 3dll:X, 2207-2216