Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(008)-Hairpin cluster 609 (cutoff=1.5 Å)
Cluster size 24 structure(s)
Representative structure 2f4v:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence NSMHVRSN
Cluster members
AGGAGACU
1grz:A, 137-146, 1grz:B, 137-146
CCGCAAGG
2f4v:A, 868-877
CCGCGAGG
1i94:A, 1005-1014, 1i95:A, 1005-1014, 2v47:A, 2725-2734, 2v49:A, 2725-2734
CCUUCGGG
1aud:B, 8-17
GCGAAAGC
1yl4:A, 1141-1150
GGGAAACU
1fka:A, 146-155, 1m5k:B, 72-81, 1m5o:B, 72-81, 1m5p:B, 72-81, 1m5v:B, 72-81, 1n33:A, 146-155, 2f4v:A, 146-155, 2ow8:y, 146-155
GGUCGACU
2gya:0, 817-826
GGUUCGCC
2czj:B, 23-32, 2czj:F, 23-32
UCGUAAGA
1xbp:0, 131-140, 1z58:2, 131-140
UCUUCGGA
1yls:D, 18-27
UCUUCGGU
2hgh:B, 30-39