Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(015)-Segment cluster 21 (cutoff=3.0 Å)
Cluster size 104 structure(s)
Representative structure 1k9m:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence GAUAGYGKASHAGUA
Cluster members
GAUAGCGAAGUAGUA
3bbo:A, 427-443
GAUAGCGCACCAGUA
1vsa:w, 472-488, 1vsp:w, 472-488, 1yl3:A, 471-487, 2b66:A, 471-487, 2b9n:A, 471-487, 2b9p:A, 471-487, 2hgj:A, 471-487, 2hgq:A, 471-487, 2hgu:A, 471-487, 2j01:A, 460-476, 2j03:A, 460-476, 2jl6:A, 460-476, 2jl8:A, 460-476, 3d5b:A, 467-483, 3d5d:A, 467-483
GAUAGUGAACAAGUA
1ffk:0, 442-458, 1jj2:0, 443-459, 1k73:A, 443-459, 1k8a:A, 443-459, 1k9m:A, 443-459, 1kc8:A, 443-459, 1kd1:A, 443-459, 1kqs:0, 443-459, 1m1k:A, 443-459, 1m90:A, 443-459, 1n8r:A, 443-459, 1nji:A, 443-459, 1q7y:A, 443-459, 1q81:A, 443-459, 1q82:A, 443-459, 1q86:A, 443-459, 1qvf:0, 443-459, 1qvg:0, 443-459, 1s1i:3, 442-458, 1s72:0, 443-459, 1vq4:0, 443-459, 1vq5:0, 443-459, 1vq6:0, 443-459, 1vq7:0, 443-459, 1vq8:0, 443-459, 1vq9:0, 443-459, 1vqk:0, 443-459, 1vql:0, 443-459, 1vqm:0, 443-459, 1vqn:0, 443-459, 1vqo:0, 443-459, 1vqp:0, 443-459, 1w2b:0, 443-459, 1yhq:0, 443-459, 1yi2:0, 443-459, 1yij:0, 443-459, 1yit:0, 443-459, 1yj9:0, 443-459, 1yjn:0, 443-459, 1yjw:0, 443-459, 2otj:0, 443-459, 2otl:0, 443-459, 2qa4:0, 443-459, 2qex:0, 443-459, 3cc2:0, 443-459, 3cc4:0, 443-459, 3cc7:0, 443-459, 3cce:0, 443-459, 3ccj:0, 443-459, 3ccl:0, 443-459, 3ccm:0, 443-459, 3ccq:0, 443-459, 3ccr:0, 443-459, 3ccs:0, 443-459, 3ccu:0, 443-459, 3ccv:0, 443-459, 3cd6:0, 443-459, 3cma:0, 443-459, 3cme:0, 443-459, 3cpw:0, 443-459
GAUAGUGAACCAGUA
1vs6:B, 445-461, 1vs8:B, 445-461, 2aw4:B, 445-461, 2awb:B, 445-461, 2gya:0, 388-404, 2gyc:0, 388-404, 2i2t:B, 445-461, 2i2v:B, 445-461, 2j28:B, 445-461, 2qam:B, 445-461, 2qao:B, 445-461, 2qba:B, 445-461, 2qbc:B, 445-461, 2qbe:B, 445-461, 2qbg:B, 445-461, 2qbi:B, 445-461, 2qbk:B, 445-461, 2qov:B, 445-461, 2qox:B, 445-461, 2qoz:B, 445-461, 2qp1:B, 445-461, 2vhm:B, 445-461, 2vhn:B, 445-461, 2z4l:B, 445-461, 2z4n:B, 445-461, 3bbx:B, 445-461, 3df2:B, 445-461, 3df4:B, 445-461