Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
(006)-Segment cluster 1829 (cutoff=2.0 Å)
Cluster size 48 structure(s)
Representative structure 2o44:A (&rarr PDB)
Downloads Representative structure (PDB) (MC-Annotate)
Member list
Consensus sequence NNNNDV
Cluster members
AUGAAA
3bbn:A, 847-854
CCAGAA
2b66:A, 1491-1498, 2b9n:A, 1491-1498, 2b9p:A, 1491-1498
CGCCAC
2pcw:A, 5-12
GACAAA
2nz4:P, 119-126, 2nz4:Q, 119-126, 2nz4:R, 119-126, 2nz4:S, 119-126, 3bbn:A, 1189-1196
GACUAA
1vs6:B, 8-15, 1vs8:B, 8-15, 2aw4:B, 8-15, 2i2t:B, 8-15, 2i2v:B, 8-15, 2qam:B, 8-15, 2qao:B, 8-15, 2qba:B, 8-15, 2qbc:B, 8-15, 2qbe:B, 8-15, 2qbg:B, 8-15, 2qbi:B, 8-15, 2qbk:B, 8-15, 2qov:B, 8-15, 2qox:B, 8-15, 2qoz:B, 8-15, 2qp1:B, 8-15, 2vhm:B, 8-15, 2vhn:B, 8-15, 2z4l:B, 8-15, 2z4n:B, 8-15, 3df2:B, 8-15, 3df4:B, 8-15
GCGAAG
2aar:0, 1490-1497, 2o43:A, 1490-1497
GGGUGC
2vqe:A, 995-1002
UAGUAA
1y69:0, 8-15, 2o43:A, 8-15, 2o44:A, 8-15, 2ogm:0, 8-15, 2zjq:X, 8-15, 3dll:X, 8-15
UAUCGA
2fey:A, 5-12
UGGGUA
2gyc:0, 1108-1115
UGGUAA
1vsa:w, 8-15, 1vsp:w, 8-15, 2hgq:A, 8-15, 2hgu:A, 8-15